Commit 197cb5ec authored by NUNEZ Arturo's avatar NUNEZ Arturo
Browse files

Automatic commit mercredi 20 juin 2018, 16:30:01 (UTC+0200)

parent 0f3fe404
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{
"cells": [
{
"cell_type": "code",
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"metadata": {
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"source": [
"%matplotlib notebook\n",
"%load_ext autoreload\n",
"%autoreload 2"
]
},
{
"cell_type": "code",
"execution_count": 2,
"metadata": {
"collapsed": true
},
"outputs": [],
"source": [
"\n",
"from scipy.stats import rv_continuous\n",
"from scipy.interpolate import interp1d\n",
"from matplotlib.patches import Circle\n",
"from scipy.special import gamma\n",
"import numpy as np\n",
"import emcee\n",
"from mpl_toolkits.axes_grid1 import make_axes_locatable\n",
"from numpy import exp, sqrt\n",
"from scipy.integrate import quad, dblquad, nquad\n",
"import matplotlib.patches as patches\n",
"from itertools import product\n",
"from scipy.integrate import quad\n",
"import scipy.optimize as optimize\n",
"import matplotlib.pyplot as plt\n",
"import matplotlib as mpl\n",
"from sklearn.neighbors import KDTree\n",
"import sys\n",
"import lmfit\n",
"from py_unsio import *\n",
"import pymc\n",
"import os\n",
"import datetime\n",
"from pymodelfit import FunctionModel1DAuto\n",
"import wkbl\n",
"from wkbl.astro.halo_info import *\n",
"from mpl_toolkits.mplot3d import axes3d\n",
"from matplotlib import cm\n",
"import wkbl.astro.nbody_essentials as nbe\n",
"import cfalcon\n",
"CF =cfalcon.CFalcon()\n",
"import iminuit\n",
"from iminuit import Minuit, describe, Struct\n",
"import probfit\n",
"from matplotlib.colors import LogNorm\n",
"from matplotlib.ticker import FormatStrFormatter"
]
},
{
"cell_type": "code",
"execution_count": 3,
"metadata": {
"collapsed": true
},
"outputs": [],
"source": [
"evolution1 = evolution2 = evolution3 = np.array([]) "
]
},
{
"cell_type": "code",
"execution_count": 1,
"metadata": {
"collapsed": false,
"scrolled": true
},
"outputs": [
{
"ename": "NameError",
"evalue": "name 'HALOBHydro' is not defined",
"output_type": "error",
"traceback": [
"\u001b[0;31m---------------------------------------------------------------------------\u001b[0m",
"\u001b[0;31mNameError\u001b[0m Traceback (most recent call last)",
"\u001b[0;32m<ipython-input-1-885a0892541d>\u001b[0m in \u001b[0;36m<module>\u001b[0;34m()\u001b[0m\n\u001b[1;32m 1\u001b[0m \u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0;32m----> 2\u001b[0;31m \u001b[0mhalo\u001b[0m \u001b[0;34m=\u001b[0m \u001b[0mHALOBHydro\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mwhere\u001b[0m\u001b[0;34m=\u001b[0m\u001b[0;34m\"home\"\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[0m\u001b[1;32m 3\u001b[0m \u001b[0ma\u001b[0m \u001b[0;34m=\u001b[0m \u001b[0mdatetime\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mdatetime\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mnow\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m 4\u001b[0m \u001b[0mmyhydro\u001b[0m \u001b[0;34m=\u001b[0m \u001b[0mwkbl\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mGalaxy_Hound\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0mhalo\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mpath\u001b[0m\u001b[0;34m,\u001b[0m\u001b[0;34m\"halo,stars\"\u001b[0m\u001b[0;34m,\u001b[0m\u001b[0mgas\u001b[0m\u001b[0;34m=\u001b[0m\u001b[0mFalse\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n\u001b[1;32m 5\u001b[0m \u001b[0mb\u001b[0m \u001b[0;34m=\u001b[0m \u001b[0mdatetime\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mdatetime\u001b[0m\u001b[0;34m.\u001b[0m\u001b[0mnow\u001b[0m\u001b[0;34m(\u001b[0m\u001b[0;34m)\u001b[0m\u001b[0;34m\u001b[0m\u001b[0m\n",
"\u001b[0;31mNameError\u001b[0m: name 'HALOBHydro' is not defined"
]
}
],
"source": [
"\n",
"halo = HALOBHydro(where=\"home\") \n",
"a = datetime.datetime.now()\n",
"myhydro = wkbl.Galaxy_Hound(halo.path,\"halo,stars\",gas=False)\n",
"b = datetime.datetime.now()\n",
"evolution1 = np.append(evolution1,(b-a).seconds)\n",
"print \"1st step took {0} s\".format((b-a).seconds)\n",
"myhydro.center_shift(halo.c_st_rho)\n",
"c = datetime.datetime.now()\n",
"evolution2 = np.append(evolution2,(c-b).seconds)\n",
"print \"2nd step took {0} s\".format((c-b).seconds)\n",
"myhydro.r_virial(600,n=25)\n",
"d = datetime.datetime.now()\n",
"evolution3 = np.append(evolution3,(d-c).seconds)\n",
"print \"3rd step took {0} s\".format((d-c).seconds)"
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {
"collapsed": false
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"outputs": [],
"source": [
"\n"
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"metadata": {
"collapsed": true
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"source": []
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{
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{
"data": {
"text/plain": [
"223"
]
},
"execution_count": 14,
"metadata": {},
"output_type": "execute_result"
}
],
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"name": "python",
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"latex_envs": {
"bibliofile": "biblio.bib",
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%% Cell type:code id: tags:
``` python
%matplotlib notebook
%load_ext autoreload
%autoreload 2
```
%% Cell type:code id: tags:
``` python
from scipy.stats import rv_continuous
from scipy.interpolate import interp1d
from matplotlib.patches import Circle
from scipy.special import gamma
import numpy as np
import emcee
from mpl_toolkits.axes_grid1 import make_axes_locatable
from numpy import exp, sqrt
from scipy.integrate import quad, dblquad, nquad
import matplotlib.patches as patches
from itertools import product
from scipy.integrate import quad
import scipy.optimize as optimize
import matplotlib.pyplot as plt
import matplotlib as mpl
from sklearn.neighbors import KDTree
import sys
import lmfit
from py_unsio import *
import pymc
import os
import datetime
from pymodelfit import FunctionModel1DAuto
import wkbl
from wkbl.astro.halo_info import *
from mpl_toolkits.mplot3d import axes3d
from matplotlib import cm
import wkbl.astro.nbody_essentials as nbe
import cfalcon
CF =cfalcon.CFalcon()
import iminuit
from iminuit import Minuit, describe, Struct
import probfit
from matplotlib.colors import LogNorm
from matplotlib.ticker import FormatStrFormatter
```
%% Cell type:code id: tags:
``` python
evolution1 = evolution2 = evolution3 = np.array([])
```
%% Cell type:code id: tags:
``` python
halo = HALOBHydro(where="home")
a = datetime.datetime.now()
myhydro = wkbl.Galaxy_Hound(halo.path,"halo,stars",gas=False)
b = datetime.datetime.now()
evolution1 = np.append(evolution1,(b-a).seconds)
print "1st step took {0} s".format((b-a).seconds)
myhydro.center_shift(halo.c_st_rho)
c = datetime.datetime.now()
evolution2 = np.append(evolution2,(c-b).seconds)
print "2nd step took {0} s".format((c-b).seconds)
myhydro.r_virial(600,n=25)
d = datetime.datetime.now()
evolution3 = np.append(evolution3,(d-c).seconds)
print "3rd step took {0} s".format((d-c).seconds)
```
%%%% Output: error
---------------------------------------------------------------------------
NameError Traceback (most recent call last)
<ipython-input-1-885a0892541d> in <module>()
1
----> 2 halo = HALOBHydro(where="home")
3 a = datetime.datetime.now()
4 myhydro = wkbl.Galaxy_Hound(halo.path,"halo,stars",gas=False)
5 b = datetime.datetime.now()
NameError: name 'HALOBHydro' is not defined
%% Cell type:code id: tags:
``` python
```
%% Cell type:code id: tags:
``` python
```
%% Cell type:code id: tags:
``` python
```
%%%% Output: execute_result
223
%% Cell type:code id: tags:
``` python
```
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