add Continous Integration

.gitlab-ci.yml

+#
+# Copyright Jean-Charles Lambert, 2018-2019
+#
+# - YAML file for Continous Integration / Continous Deployement
+# - unsio and python-unsio packages (RPM or DEB) are automatically
+#   generated at new commit for different linux distribution
+# - add manylinux building for python-module
+#
+# - Documentation :
+#   https://docs.gitlab.com/ee/ci/yaml/
+
+stages:
+- manylinux
+
+before_script:
+  # clone
+  #- git clone https://gitlab.lam.fr/jclamber/unsio.git
+  #- cd unsio
+  #- git branch -r
+  #- git checkout origin/new_cmake
+
+manylinux2010 :
+  stage : manylinux
+  image : portus.lam.fr/jclamber/unsio June-manylinux2010
+  script:
+    # build
+    CI/script/build-unsio.sh
+    CI/script/build-wheel.sh
+    CI/script/repair-wheel.sh
+    CI/script/test-unsio.sh
+  artifacts:
+    name: "manylinux2010"
+    paths:
+      - test-*.res
+      - wheel/*
+
+#
+# RPM Distros
+#
+opensuse42.3 :
+  stage : build
+  image: ppfb.lam.fr:5000/jcl-dev/opensuse42.3
+  only :
+  - tags
+  script:
+  # build
+  - ../CI/build-rpm.sh 0opensuse42.3
+  artifacts:
+    name: "opensuse42.3"
+    paths:
+    - unsio/build/*.rpm
+    - unsio/dist/*.rpm
+    - unsio/dist/*.gz
+
+fedora28 :
+  stage : build
+  image: ppfb.lam.fr:5000/jcl-dev/fedora28
+  only :
+  - tags
+  script:
+  # build
+  - ../CI/build-rpm.sh 0fc28
+  artifacts:
+    name: "fedora28"
+    paths:
+    - unsio/build/*.rpm
+    - unsio/dist/*.rpm
+    - unsio/dist/*.gz
+
+fedora27 :
+  stage : build
+  image: ppfb.lam.fr:5000/jcl-dev/fedora27
+  only :
+  - tags
+  script:
+  # build
+  - ../CI/build-rpm.sh 0fc27
+  artifacts:
+    name: "fedora27"
+    paths:
+    - unsio/build/*.rpm
+    - unsio/dist/*.rpm
+    - unsio/dist/*.gz
+
+mageia6 :
+  stage : build
+  image: ppfb.lam.fr:5000/jcl-dev/mageia6
+  only :
+  - tags
+  script:
+  # build
+  - ../CI/build-rpm.sh 0mga6
+  artifacts:
+    name: "mageia6"
+    paths:
+    - unsio/build/*.rpm
+    - unsio/dist/*.rpm
+    - unsio/dist/*.gz
+#
+# DEB distos
+#
+ubuntu 18.04:
+  stage : build
+  image: ppfb.lam.fr:5000/jcl-dev/ubuntu18.04
+  only :
+  - tags
+  script:
+  # build
+  - ../CI/build-deb.sh 0ubuntu18.04
+  artifacts:
+    name: "ubuntu18.04"
+    paths:
+    - unsio/build/*.deb
+    - unsio/my_deb/*.deb
+    - unsio/my_deb/*.gz
+
+ubuntu 16.04:
+  stage : build
+  image: ppfb.lam.fr:5000/jcl-dev/ubuntu16.04
+  only :
+  - tags
+  script:
+  # build
+  - ../CI/build-deb.sh 0ubuntu16.04
+  artifacts:
+    name: "ubuntu16.04"
+    paths:
+    - unsio/build/*.deb
+    - unsio/my_deb/*.deb
+    - unsio/my_deb/*.gz

CI/Dockerfile

+FROM quay.io/pypa/manylinux2010_x86_64
+
+RUN yum install -y gcc-c++ make pcre-devel ccache wget \
+                   hdf5-devel cmake3 cfitsio-devel zlib-devel
+
+
+# Install SWIG 4.0.1 
+RUN                              \
+ cd /opt                       &&\
+ curl -L 'https://sourceforge.net/projects/swig/files/swig/swig-4.0.1/swig-4.0.1.tar.gz' \
+ --output swig-4.0.1.tar.gz    &&\
+ tar xzf swig-4.0.1.tar.gz     &&\
+ cd /opt/swig-4.0.1            &&\
+ ./configure --prefix=/opt/usr &&\
+ make -j4 && make install
+
+# Install numpy minimum requirements for swig
+# Install twin
+RUN                               \
+  /opt/python/cp27-cp27m/bin/pip  install numpy==1.8.2  twine    &&\
+  /opt/python/cp27-cp27mu/bin/pip install numpy==1.8.2  twine    &&\
+  /opt/python/cp34-cp34m/bin/pip  install numpy==1.8.2  twine    &&\
+  /opt/python/cp35-cp35m/bin/pip  install numpy==1.9.0  twine    &&\
+  /opt/python/cp36-cp36m/bin/pip  install numpy==1.11.3 twine    &&\
+  /opt/python/cp37-cp37m/bin/pip  install numpy==1.14.5 twine 
+
+# trick to resize image
+
+FROM quay.io/pypa/manylinux2010_x86_64
+
+RUN yum install -y gcc-c++ make pcre-devel ccache wget \
+                   hdf5-devel cmake3 cfitsio-devel zlib-devel
+
+COPY --from=0 /opt/usr /opt/usr
+COPY --from=0 /opt/python /opt/python
+COPY --from=0 /opt/_internal /opt/_internal
+
+ENV PATH /opt/usr/bin/:$PATH

CI/script/build-unsio.sh

+#!/bin/bash
+
+cmake3 . -DCMAKE_INSTALL_PREFIX=/usr
+make -j 5
+make install

CI/script/build-wheel.sh

+
+
+# build wheel
+#PATH=/opt/usr/bin/:/opt/python/cp27-cp27m/bin:${PATH}  pip wheel ./unsio/ -w wheelhouse
+
+
+# build wheel
+for PYBIN in /opt/python/*/bin/; do
+    echo "Compiling using pip version ${PYBIN}...."
+    PATH=/opt/usr/bin/:${PYBIN}:${PATH}   pip wheel --no-deps ./ -w wheelhouse
+done
+
+# repair wheel
+#auditwheel repair wheelhouse/python_unsio-0.9.3rc3-cp27-cp27m-linux_x86_64.whl -w ./wheel-repaired
+
+
+# test
+#PATH=/opt/usr/bin/:/opt/python/cp27-cp27m/bin:${PATH} python -m unsio.test.ctestunsio

CI/script/clone-unsio.sh

+
+cd /
+git clone https://gitlab.lam.fr/jclamber/unsio.git
+cd /unsio
+git checkout --track origin/saveheader

CI/script/repair-wheel.sh

+
+
+
+# Bundle external shared libraries into the wheels
+for whl in wheelhouse/*unsio*.whl; do
+    echo "repairing $whl...."
+    auditwheel repair "$whl" -w  ./wheel
+done
+

CI/script/test-unsio.sh

+
+# install & test wheel
+for PYPATH in /opt/python/*; do
+    echo "Testing with ${PYPATH}...."
+    PATH=/opt/usr/bin/:${PYPATH}/bin:${PATH} pip install wheelhouse/*unsio*`basename ${PYPATH}`*.whl
+    PATH=/opt/usr/bin/:${PYPATH}/bin:${PATH} python -m unsio.test.ctestunsio --out test-`basename ${PYPATH}`.res
+done
+